2025

Strokeformer: A novel deep learning paradigm training transformer-based architecture for stroke prognosis prediction

Strokeformer: A novel deep learning paradigm training transformer-based architecture for stroke prognosis prediction

M Cao , H Jinn , Y Wang , L Wang , Jianqiang Li , J Ji
PLOS One 2025
IBEX: Information-Bottleneck-EXplored Coarse-to-Fine Molecular Generation under Limited Data

IBEX: Information-Bottleneck-EXplored Coarse-to-Fine Molecular Generation under Limited Data

Dong Xu , Zhangfan Yang , Jenna Xinyi Yao , Shuangbao Song , Zexuan Zhu , Junkai Ji
PLOS One 2025
FROGENT: An End-to-End Full-process Drug Design Agent

FROGENT: An End-to-End Full-process Drug Design Agent

Qihua Pan , Dong Xun , Jenna Xinyi Yao , L Wang , Lijia Mai , Zexuan Zhu , Junkai Ji
arXiv 2025
A Dual-Directional Context-Aware Test-Time Learning for Text Classification

A Dual-Directional Context-Aware Test-Time Learning for Text Classification

Dong Xu , Mengyao Liao , Zhenglin Lai , Xueliang Li , Junkai Ji
International Conference on Intelligent Computing 2025
Federated Intrusion Detection System With Cost-Sensitive Learning for Internet of Thingsn

Federated Intrusion Detection System With Cost-Sensitive Learning for Internet of Thingsn

Qiuzhen Lin , Wang Liu , Shaifeng Zheng , Junkai Ji , Ka-Chun Wong Jianqiang Li , Carlos A Coello Coello
IEEE Internet of Things Journal 2025
MODA: A Unified 3D Diffusion Framework for Multi-Task Target-Aware Molecular Generation

MODA: A Unified 3D Diffusion Framework for Multi-Task Target-Aware Molecular Generation

Dong Xu , Zhangfan Yang , Sisi Yuan , Jenna Xinyi Yao , Jiangqiang Li , Junkai Ji
arXiv 2025
Phage Host Prediction Using Deep Neural Network with Multi-source Protein Language Models and Squeeze-and-Excitation Attention Mechanism

Phage Host Prediction Using Deep Neural Network with Multi-source Protein Language Models and Squeeze-and-Excitation Attention Mechanism

Peng Gao , Long Xu , Yuan Bai , Qiuzhen Lin , Junkai Ji , Lijia Ma
IEEE Journal of Biomedical and Health Informatics 2025
Reimagining Target-Aware Molecular Generation through Retrieval-Enhanced Aligned Diffusion

Reimagining Target-Aware Molecular Generation through Retrieval-Enhanced Aligned Diffusion

Dong Xu , Zhangfan Yang , Ka-chun Wong , Zexuan Zhu , Jiangqiang Li , Junkai Ji
arXiv 2025
Reimagining Target-Aware Molecular Generation through Retrieval-Enhanced Aligned Diffusion

Reimagining Target-Aware Molecular Generation through Retrieval-Enhanced Aligned Diffusion

Dong Xu , Zhangfan Yang , Ka-chun Wong , Zexuan Zhu , Jiangqiang Li , Junkai Ji
arXiv 2025
A Node-Degree Power-Law Distribution-Based Honey Badger Algorithm for Global and Engineering Optimization

A Node-Degree Power-Law Distribution-Based Honey Badger Algorithm for Global and Engineering Optimization

Shuangyu Song , Zhenyu Song , Xingqian Chen , Junkai Ji
Electronics 2025
A Logic Circuit-Based Intrusion Detection System Using a Dendritic Neural Model Ensemble

A Logic Circuit-Based Intrusion Detection System Using a Dendritic Neural Model Ensemble

Junkai Ji , Haochang Jin , Jiajun Zhao , Qiuzhen Lin , Jianqiang Li , Zexuan Zhu
IEEE Computational Intelligence Magazine 2025